Welcome to plco-analysis’s documentation!

Contents:

• Installation
  • Overview
  • Short Version (for experts)
  • Long Version (for interested parties)
• Preprocessing
  • Overview
  • Relatedness
  • Ancestry Estimation
  • Genotype Cleaning by Ancestry
  • Imputed Data Reformatting
  • 1000 Genomes Reference Data
  • LD Score/BOLT Reference Files
• Primary Analysis
• Meta-Analysis
• Postprocessing
• Globus Distribution
• User Vignette
• Advanced Development Notes

Indices and tables

• Index

• Module Index

• Search Page